Protein ZmOrphan22
ZmOrphan22 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan22
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym):
Uniprot ID: A0A1D6PDQ1
Subgenome: 1

Protein ZmOrphan22

ZmOrphan22 is a protein in the Orphans family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF00481
Zm00001eb012350_T002
Zm00001eb012350_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d028615DAPseq no logo sequence fimo position
Zm00001d028615DAPseq no logo sequence fimo position
Zm00001d028615ChIPseq no logo sequence fimo position
Zm00001d028615PChIPseq no logo sequence fimo position

Interactions where ZmOrphan22 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan22 is the target  
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There are 98 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb012350_T002 from maize genome v5

Amino Acid Sequence
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MGNGITKNPCFSGDSYAAAVASDPLPDDSHGHSFTYVPSGAAFDQPQTSAATSSESSFFSLSGAAISANPATSASMPSFR
LFNELTWPPSTACTFESSRSFSAIPLQAAPPRLSMSGPVQFTSGRFSETSGSTSTISGTPSDRPFMSGPLDHSLSISSSS
AGLLHPSVSQLIAERRAARSRLRDERSLLRFFVRTASKLWLGSPRYGRRPQEPADPIKFSFSDGDYRSPPNSNVEWAQGM
AGEDRFHVAVSEEHGWVFVGIYDGFNGPDATDYLFANLYVAVHNELKGLLWDGIQAGDSARCGEQEAGAGNAERLCIAQA
DGDGAEAKRRRTEVPMPGNSATPVHRDVLRALARALKKTEEAFFAAAEERAAESPELGLMGSCVLVMVMKGTDVYVMNVG
DSRAVLARRPEPDLKNVLGKASQDLQQFKVEIMRELEAHDMDGLQAVQLTPEHSTAVQEEVTRIKGQHLNDRNAIVNGRV
KGKINVTRAFGVAYLKQPKWNSRLLEAFKINYVGTDPYVTCAPSLCHHRIGSQDKFLVLSSDGLYQFFTNKEVVDQVEAF
TAAEPDGDPAQHLVGELVNRAARKAGERPNPSMSTHIWTPGLHLVQCSTIRPDEFVLILLRCRHGDAPAAGHPARREEAL
PRRRLHHRHLVRGADLEVVCLGVSCLSLTWFSEVQGVLVGQMRRRDGMRRRWSTVSRARARRCHELPSVSGYRFWFTLYH
ILEPCSFLPKLLYIVPQDEL

MGNGITKNPCFSGDSYAAAVASDPLPDDSHGHSFTYVPSGAAFDQPQTSAATSSESSFFSLSGAAISANPATSASMPSFR
LFNELTWPPSTACTFESSRSFSAIPLQAAPPRLSMSGPVQFTSGRFSETSGSTSTISGTPSDRPFMSGPLDHSLSISSSS
AGLLHPSVSQLIAERRAARSRLRDERSLLRFFVRTASKLWLGSPRYGRRPQEPADPIKFSFSDGDYRSPPNSNVEWAQGM
AGEDRFHVAVSEEHGWVFVGIYDGFNGPDATDYLFANLYVAVHNELKGLLWDGIQAGDSARCGEQEAGAGNAERLCIAQA
DGDGAEAKRRRTEVPMPGNSATPVHRDVLRALARALKKTEEAFFAAAEERAAESPELGLMGSCVLVMVMKGTDVYVMNVG
DSRAVLARRPEPDLKNVLGKASQDLQQFKVEIMRELEAHDMDGLQAVQLTPEHSTAVQEEVTRIKGQHLNDRNAIVNGRV
KGKINVTRAFGVAYLKQPKWNSRLLEAFKINYVGTDPYVTCAPSLCHHRIGSQDKFLVLSSDGLYQFFTNKEVVDQVEAF
TAAEPDGDPAQHLVGELVNRAARKAGERPNPSMSTHIWTPGLHLVQCSTIRPDEFVLILLRCRHGDAPAAGHPARREEAL
PRRRLHHRHLVRGADLEVVCLGVSCLSLTWFSEVQGVLVGQMRRRDGMRRRWSTVSRARARRCHELPSVSGYRFWFTLYH
ILEPCSFLPKLLYIVPQDEL

MGNGITKNPCFSGDSYAAAVASDPLPDDSHGHSFTYVPSGAAFDQPQTSAATSSESSFFSLSGAAISANPATSASMPSFR
LFNELTWPPSTACTFESSRSFSAIPLQAAPPRLSMSGPVQFTSGRFSETSGSTSTISGTPSDRPFMSGPLDHSLSISSSS
AGLLHPSVSQLIAERRAARSRLRDERSLLRFFVRTASKLWLGSPRYGRRPQEPADPIKFSFSDGDYRSPPNSNVEWAQGM
AGEDRFHVAVSEEHGWVFVGIYDGFNGPDATDYLFANLYVAVHNELKGLLWDGIQAGDSARCGEQEAGAGNAERLCIAQA
DGDGAEAKRRRTEVPMPGNSATPVHRDVLRALARALKKTEEAFFAAAEERAAESPELGLMGSCVLVMVMKGTDVYVMNVG
DSRAVLARRPEPDLKNVLGKASQDLQQFKVEIMRELEAHDMDGLQAVQLTPEHSTAVQEEVTRIKGQHLNDRNAIVNGRV
KGKINVTRAFGVAYLKQPKWNSRLLEAFKINYVGTDPYVTCAPSLCHHRIGSQDKFLVLSSDGLYQFFTNKEVVDQVEAF
TAAEPDGDPAQHLVGELVNRAARKAGERPNPSMSTHIWTPGLHLVQCSTIRPDEFVLILLRCRHGDAPAAGHPARREEAL
PRRRLHHRHLVRGADLEVVCLGVSCLSLTWFSEVQGVLVGQMRRRDGMRRRWSTVSRARARRCHELPSVSGYRFWFTLYH
ILEPCSFLPKLLYIVPQDEL

MGNGITKNPCFSGDSYAAAVASDPLPDDSHGHSFTYVPSGAAFDQPQTSAATSSESSFFSLSGAAISANPATSASMPSFR
LFNELTWPPSTACTFESSRSFSAIPLQAAPPRLSMSGPVQFTSGRFSETSGSTSTISGTPSDRPFMSGPLDHSLSISSSS
AGLLHPSVSQLIAERRAARSRLRDERSLLRFFVRTASKLWLGSPRYGRRPQEPADPIKFSFSDGDYRSPPNSNVEWAQGM
AGEDRFHVAVSEEHGWVFVGIYDGFNGPDATDYLFANLYVAVHNELKGLLWDGIQAGDSARCGEQEAGAGNAERLCIAQA
DGDGAEAKRRRTEVPMPGNSATPVHRDVLRALARALKKTEEAFFAAAEERAAESPELGLMGSCVLVMVMKGTDVYVMNVG
DSRAVLARRPEPDLKNVLGKASQDLQQFKVEIMRELEAHDMDGLQAVQLTPEHSTAVQEEVTRIKGQHLNDRNAIVNGRV
KGKINVTRAFGVAYLKQPKWNSRLLEAFKINYVGTDPYVTCAPSLCHHRIGSQDKFLVLSSDGLYQFFTNKEVVDQVEAF
TAAEPDGDPAQHLVGELVNRAARKAGERPNPSMSTHIWTPGLHLVQCSTIRPDEFVLILLRCRHGDAPAAGHPARREEAL
PRRRLHHRHLVRGADLEVVCLGVSCLSLTWFSEVQGVLVGQMRRRDGMRRRWSTVSRARARRCHELPSVSGYRFWFTLYH
ILEPCSFLPKLLYIVPQDEL

MGNGITKNPCFSGDSYAAAVASDPLPDDSHGHSFTYVPSGAAFDQPQTSAATSSESSFFSLSGAAISANPATSASMPSFR
LFNELTWPPSTACTFESSRSFSAIPLQAAPPRLSMSGPVQFTSGRFSETSGSTSTISGTPSDRPFMSGPLDHSLSISSSS
AGLLHPSVSQLIAERRAARSRLRDERSLLRFFVRTASKLWLGSPRYGRRPQEPADPIKFSFSDGDYRSPPNSNVEWAQGM
AGEDRFHVAVSEEHGWVFVGIYDGFNGPDATDYLFANLYVAVHNELKGLLWDGIQAGDSARCGEQEAGAGNAERLCIAQA
DGDGAEAKRRRTEVPMPGNSATPVHRDVLRALARALKKTEEAFFAAAEERAAESPELGLMGSCVLVMVMKGTDVYVMNVG
DSRAVLARRPEPDLKNVLGKASQDLQQFKVEIMRELEAHDMDGLQAVQLTPEHSTAVQEEVTRIKGQHLNDRNAIVNGRV
KGKINVTRAFGVAYLKQPKWNSRLLEAFKINYVGTDPYVTCAPSLCHHRIGSQDKFLVLSSDGLYQFFTNKEVVDQVEAF
TAAEPDGDPAQHLVGELVNRAARKAGERPNPSMSTHIWTPGLHLVQCSTIRPDEFVLILLRCRHGDAPAAGHPARREEAL
PRRRLHHRHLVRGADLEVVCLGVSCLSLTWFSEVQGVLVGQMRRRDGMRRRWSTVSRARARRCHELPSVSGYRFWFTLYH
ILEPCSFLPKLLYIVPQDEL

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00481
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Nucleotide Sequence
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CAAAAGGTCAACTCTTCCATCCCCT...

GRMZM2G112925_T01 from maize genome v3


Related TFome: pUT4973

Amino Acid Sequence
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MGNGITKNPCFSGDSYAAAVASDPLPDDSHGHSFTYVPSGAAFDQPQTSAATSSESSFFSLSGAAISANPATSASMPSFR
LFNELTWPPSTACTFESSRSFSAIPLQAAPPRLSMSGPVQFTSGRFSETSGSTSTISGTPSDRPFMSGPLDHSLSISSSS
AGLLHPSVSQLIAERRAARSRLRDERSLLRFFVRTASKLWLGSPRYGRRPQEPADPIKFSFSDGDYRSPPNSNVEWAQGM
AGEDRFHVAVSEEHGWVFVGIYDGFNGPDATDYLFANLYVAVHNELKGLLWDGIQAGDSARCGEQEAGAGNAERLCIAQA
DGDGAEAKRRRTEVPMPGNSATPVHRDVLRALARALKKTEEAFFAAAEERAAESPELGLMGSCVLVMVMKGTDVYVMNVG
DSRAVLARRPEPDLKNVLGKASQDLQQFKVEIMRELEAHDMDGLQAVQLTPEHSTAVQEEVTRIKGQHLNDRNAIVNGRV
KGKINVTRAFGVAYLKQPKWNSRLLEAFKINYVGTDPYVTCAPSLCHHRIGSQDKFLVLSSDGLYQFFTNKEVVDQVEAF
TAAEPDGDPAQHLVGELVNRAARKAWRRASCWTSRAARGGTTTTTSPSSSSRSRGGSGGRLSRCVVSESDVVFRGPRRPR
RSDEEERWNEEAMVDSLKGEGTALP

Nucleotide Sequence
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TGGGTACCCCAAGCAAGAGCGCCAC...

GRMZM2G112925_T02 from maize genome v3

Amino Acid Sequence
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MGNGITKNPCFSGDSYAAAVASDPLPDDSHGHSFTYVPSGAAFDQPQTSAATSSESSFFSLSGAAISANPATSASMPSFR
LFNELTWPPSTACTFESSRSFSAIPLQAAPPRLSMSGPVQFTSGRFSETSGSTSTISGTPSDRPFMSGPLDHSLSISSSS
AGLLHPSVSQLIAERRAARSRLRDERSLLRFFVRTASKLWLGSPRYGRRPQEPADPIKFSFSDGDYRSPPNSNVEWAQGM
AGEDRFHVAVSEEHGWVFVGIYDGFNGPDATDYLFANLYVAVHNELKGLLWDGIQAGDSARCGEQEAGAGNAERLCIAQA
DGDGAEAKRRRTEVPMPGNSATPVHRDVLRALARALKKTEEAFFAAAEERAAESPELGLMGSCVLVMVMKGTDVYVMNVG
DSRAVLARRPEPDLKNVLGKASQDLQQFKVEIMRELEAHDMDGLQAVQLTPEHSTAVQEEVTRIKGQHLNDRNAIVNGRV
KGKINVTRAFGVAYLKQPKWNSRLLEAFKINYVGTDPYVTCAPSLCHHRIGSQDKFLVLSSDGLYQFFTNKEVVDQVEAF
TAAEPDGDPAQHLVGELVNRAARKAGMETRQLLDIPRGARRHYHDDVSIIVISFEGRIWRSSV

Nucleotide Sequence
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TGGGTACCCCAAGCAAGAGCGCCAC...

Zm00001d028615_T001 from maize genome v4

Amino Acid Sequence
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MGNGITKNPCFSGDSYAAAVASDPLPDDSHGHSFTYVPSGAAFDQPQTSAATSSESSFFSLSGAAISANPATSASMPSFR
LFNELTWPPSTACTFESSRSFSAIPLQAAPPRLSMSGPVQFTSGRFSETSGSTSTISGTPSDRPFMSGPLDHSLSISSSS
AGLLHPSVSQLIAERRAARSRLRDERSLLRFFVRTASKLWLGSPRYGRRPQEPADPIKFSFSDGDYRSPPNSNVEWAQGM
AGEDRFHVAVSEEHGWVFVGIYDGFNGPDATDYLFANLYVAVHNELKGLLWDGIQAGDSARCGEQEAGAGNAERLCIAQA
DGDGAEAKRRRTEVPMPGNSATPVHRDVLRALARALKKTEEAFFAAAEERAAESPELGLMGSCVLVMVMKGTDVYVMNVG
DSRAVLARRPEPDLKNVLGKASQDLQQFKVEIMRELEAHDMDGLQAVQLTPEHSTAVQEEVTRIKGQHLNDRNAIVNGRV
KGKINVTRAFGVAYLKQPKWNSRLLEAFKINYVGTDPYVTCAPSLCHHRIGSQDKFLVLSSDGLYQFFTNKEVVDQVEAF
TAAEPDGDPAQHLVGELVNRAARKAGMETRQLLDIPRGARRHYHDDVSIIVISFEGRIWRSSV

Nucleotide Sequence
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AAGGAAACAAAATGGGCAATGGCAT...

Zm00001eb012350_T001 from maize genome v5

Amino Acid Sequence
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MGNGITKNPCFSGDSYAAAVASDPLPDDSHGHSFTYVPSGAAFDQPQTSAATSSESSFFSLSGAAISANPATSASMPSFR
LFNELTWPPSTACTFESSRSFSAIPLQAAPPRLSMSGPVQFTSGRFSETSGSTSTISGTPSDRPFMSGPLDHSLSISSSS
AGLLHPSVSQLIAERRAARSRLRDERSLLRFFVRTASKLWLGSPRYGRRPQEPADPIKFSFSDGDYRSPPNSNVEWAQGM
AGEDRFHVAVSEEHGWVFVGIYDGFNGPDATDYLFANLYVAVHNELKGLLWDGIQAGDSARCGEQEAGAGNAERLCIAQA
DGDGAEAKRRRTEVPMPGNSATPVHRDVLRALARALKKTEEAFFAAAEERAAESPELGLMGSCVLVMVMKGTDVYVMNVG
DSRAVLARRPEPDLKNVLGKASQDLQQFKVEIMRELEAHDMDGLQAVQLTPEHSTAVQEEVTRIKGQHLNDRNAIVNGRV
KGKINVTRAFGVAYLKQPKWNSRLLEAFKINYVGTDPYVTCAPSLCHHRIGSQDKFLVLSSDGLYQFFTNKEVVDQVEAF
TAAEPDGDPAQHLVGELVNRAARKAGMETRQLLDIPRGARRHYHDDVSIIVISFEGRIWRSSV

Nucleotide Sequence
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ATCCTAAAGCCTTCAGTGCCTCAGA...


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